1. Home
  2. Species
  3. Amblovenatum opulentum
  4. Sequence
  5. Aop_g36775

Aop_g36775


Description : component *(SF3B1) of splicing factor 3B complex & original description: none


Gene families : OG0002634 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002634_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g36775
Cluster HCCA: Cluster_331

Target Alias Description ECC score Gene Family Method Actions
Ala_g02669 No alias component *(SF3B1) of splicing factor 3B complex &... 0.04 OrthoFinder output from all 47 species
Als_g10272 No alias component *(SF3B1) of splicing factor 3B complex &... 0.04 OrthoFinder output from all 47 species
Ceric.02G008400.1 Ceric.02G008400 component *(SF3B1) of splicing factor 3B complex &... 0.04 OrthoFinder output from all 47 species
Dac_g02908 No alias component *(SF3B1) of splicing factor 3B complex &... 0.04 OrthoFinder output from all 47 species
Gb_12533 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_14294 No alias component SF3B1 of splicing factor 3B complex 0.03 OrthoFinder output from all 47 species
LOC_Os02g04950.1 LOC_Os02g04950 component SF3B1 of splicing factor 3B complex 0.04 OrthoFinder output from all 47 species
MA_11685g0010 No alias component SF3B1 of splicing factor 3B complex 0.04 OrthoFinder output from all 47 species
Mp5g19650.1 No alias component SF3B1 of splicing factor 3B complex 0.02 OrthoFinder output from all 47 species
Nbi_g04463 No alias component *(SF3B1) of splicing factor 3B complex &... 0.07 OrthoFinder output from all 47 species
Pnu_g13320 No alias component *(SF3B1) of splicing factor 3B complex &... 0.03 OrthoFinder output from all 47 species
Smo97336 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.03 OrthoFinder output from all 47 species
Zm00001e025224_P001 Zm00001e025224 component SF3B1 of splicing factor 3B complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR015016 SF3b_su1 285 415
No external refs found!