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  5. Aop_g36172

Aop_g36172


Description : not classified & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g36172
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AT5G13330 Rap2.6L related to AP2 6l 0.02 OrthoFinder output from all 47 species
AT5G13910 LEP Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Azfi_s0096.g043715 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.08 OrthoFinder output from all 47 species
Cba_g26091 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.05 OrthoFinder output from all 47 species
Dde_g12767 ATERF-9, ERF9, ATERF9 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_18454 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_29168 DREB26 Ethylene-responsive transcription factor ERF012... 0.04 OrthoFinder output from all 47 species
Gb_34849 ERF-1, ATERF-1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os01g64790.1 ERF110, LOC_Os01g64790 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os03g08470.1 RAP2.12, LOC_Os03g08470 Ethylene-responsive transcription factor 1 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Lfl_g15284 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21499 No alias cutin and suberin biosynthesis transcription factor... 0.03 OrthoFinder output from all 47 species
Ppi_g56213 RAP2.11 transcription factor *(ERN1) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015276 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0115.g021035 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Solyc01g090345.1.1 ATERF13, ERF13,... Ethylene-responsive transcription factor 13... 0.02 OrthoFinder output from all 47 species
Solyc03g005500.1.1 ERF14, ATERF14,... transcription factor (ERF). transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc12g056980.1.1 RAP2.4, Solyc12g056980 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Spa_g09541 ORA47 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e000611_P001 HRE1, Zm00001e000611 Ethylene-responsive transcription factor ERF073... 0.01 OrthoFinder output from all 47 species
Zm00001e003579_P001 Zm00001e003579 Ethylene-responsive transcription factor ERF015... 0.01 OrthoFinder output from all 47 species
Zm00001e034661_P001 ERF110, Zm00001e034661 Ethylene-responsive transcription factor ERF115... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA

No InterPro domains available for this sequence

No external refs found!