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  5. Aop_g35392

Aop_g35392 (AtMYB117, LOF1, MYB117)


Aliases : AtMYB117, LOF1, MYB117

Description : MYB class-R2R3 subgroup-21 transcription factor & original description: none


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g35392
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AT2G13960 No alias Homeodomain-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G40360 MYB115, AtMYB115 myb domain protein 115 0.02 OrthoFinder output from all 47 species
Adi_g047581 MYB54, ATMYB54 MYB class-R2R3 subgroup-21 transcription factor &... 0.05 OrthoFinder output from all 47 species
Aev_g11857 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.05 OrthoFinder output from all 47 species
Als_g20431 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.04 OrthoFinder output from all 47 species
Solyc06g076840.3.1 ATMYB119,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Spa_g12777 AtMYB117, LOF1, MYB117 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!