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  5. Aop_g35331

Aop_g35331 (QRT3)


Aliases : QRT3

Description : polygalacturonase *(QRT3) & original description: none


Gene families : OG0004265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004265_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g35331
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AMTR_s03255p00000400 QRT3,... Cell wall.pectin.modification and... 0.02 OrthoFinder output from all 47 species
AT4G20050 QRT3 Pectin lyase-like superfamily protein 0.05 OrthoFinder output from all 47 species
Cba_g53005 QRT3 polygalacturonase *(QRT3) & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os04g52320.1 QRT3, LOC_Os04g52320 polygalacturonase (QRT3) 0.02 OrthoFinder output from all 47 species
MA_739517g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g12922 QRT3 polygalacturonase *(QRT3) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA

No InterPro domains available for this sequence

No external refs found!