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  5. Lfl_g11979

Lfl_g11979


Description : regulatory protein *(SUO) of miRNA biogenesis pathway & original description: none


Gene families : OG0000514 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000514_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g11979

Target Alias Description ECC score Gene Family Method Actions
AT3G48050 No alias BAH domain ;TFIIS helical bundle-like domain 0.02 OrthoFinder output from all 47 species
AT3G48060 No alias BAH domain ;TFIIS helical bundle-like domain 0.02 OrthoFinder output from all 47 species
Adi_g005148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059105 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g100972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g47750 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Ala_g20600 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.05 OrthoFinder output from all 47 species
Ala_g37018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33736 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Aob_g03624 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Aob_g17691 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Aop_g03551 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Aop_g03955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0124.g048462 No alias not classified & original description: CDS=36-3404 0.03 OrthoFinder output from all 47 species
Cba_g34914 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G029300.1 Ceric.02G029300 not classified & original description: pacid=50584188... 0.04 OrthoFinder output from all 47 species
Ceric.04G080100.1 Ceric.04G080100 not classified & original description: pacid=50631023... 0.03 OrthoFinder output from all 47 species
Ceric.24G078000.1 Ceric.24G078000 regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Ehy_g31579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007806001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01009936001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01032521001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_02775 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_05084 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_05690 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g50840.2 LOC_Os02g50840 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g50850.2 LOC_Os02g50850 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g11454 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Lfl_g05021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10428034g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_33300g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_39143g0020 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp4g16160.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp4g16230.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g15696 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Nbi_g04481 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Ore_g00447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16150 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25799 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Pir_g06454 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Pir_g13634 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005145 No alias not classified & original description: CDS=1-3426 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005665 No alias not classified & original description: CDS=481-3921 0.03 OrthoFinder output from all 47 species
Sam_g29218 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.05 OrthoFinder output from all 47 species
Solyc03g114060.3.1 Solyc03g114060 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g071350.4.1 Solyc06g071350 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g089320.3.1 Solyc12g089320 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e002441_P003 Zm00001e002441 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e013353_P001 Zm00001e013353 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e037792_P001 Zm00001e037792 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e037793_P001 Zm00001e037793 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
BP GO:0016255 attachment of GPI anchor to protein IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR017923 TFIIS_N 350 399
IPR001025 BAH_dom 41 149
No external refs found!