Lfl_g11972 (FIB2, ATFIB2)

Aliases : FIB2, ATFIB2

Description : methyltransferase component *(Nop1/fibrillarin) of snoRNP rRNA methylation complex & original description: none

Gene families : OG0004335 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004335_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g11972

Target	Alias	Description	ECC score	Gene Family Method
Aop_g18685	FIB1, ATFIB1,...	methyltransferase component *(Nop1/fibrillarin) of...	0.03	OrthoFinder output from all 47 species
Azfi_s0093.g043290	FIB2, ATFIB2	not classified & original description: CDS=212-970	0.02	OrthoFinder output from all 47 species
Cba_g06671	FIB1, ATFIB1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cre02.g077300	FIB2, ATFIB2	RNA processing.RNA modification.rRNA/tRNA...	0.02	OrthoFinder output from all 47 species
Dcu_g15289	FIB2, ATFIB2	methyltransferase component *(Nop1/fibrillarin) of...	0.06	OrthoFinder output from all 47 species
GSVIVT01028887001	FIB1, ATFIB1,...	RNA processing.RNA modification.rRNA/tRNA...	0.02	OrthoFinder output from all 47 species
Nbi_g41181	FIB2, ATFIB2	methyltransferase component *(Nop1/fibrillarin) of...	0.03	OrthoFinder output from all 47 species
Pp3c6_12420V3.1	FIB2, ATFIB2, Pp3c6_12420	fibrillarin 2	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006364	rRNA processing	IEA	Interproscan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000692	Fibrillarin	68	294

External Links

No external refs found!

Lfl_g11972 (FIB2, ATFIB2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation