Aop_g33557


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g33557

Target Alias Description ECC score Gene Family Method Actions
Als_g16177 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g03915 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04924 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0005.g009250 DOT4 not classified & original description: CDS=1-1692 0.07 OrthoFinder output from all 47 species
Azfi_s0007.g010913 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-1608 0.04 OrthoFinder output from all 47 species
Azfi_s0098.g043939 EMB2758 not classified & original description: CDS=1-1746 0.06 OrthoFinder output from all 47 species
Azfi_s0235.g059459 OTP86 not classified & original description: CDS=1-2445 0.04 OrthoFinder output from all 47 species
Azfi_s0254.g060431 No alias not classified & original description: CDS=1-2856 0.05 OrthoFinder output from all 47 species
Cba_g03409 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g04675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11852 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g19568 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20040 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g20185 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G092300.1 Ceric.09G092300 not classified & original description: pacid=50588334... 0.05 OrthoFinder output from all 47 species
Ceric.13G039400.1 Ceric.13G039400 not classified & original description: pacid=50635903... 0.03 OrthoFinder output from all 47 species
Ceric.18G049300.1 Ceric.18G049300 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G040800.1 OTP86, Ceric.20G040800 not classified & original description: pacid=50566943... 0.02 OrthoFinder output from all 47 species
GSVIVT01012201001 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.02 OrthoFinder output from all 47 species
Lfl_g33323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08826 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17741 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60422 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g01903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g01947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g02642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g04440 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g05643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08776 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09909 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g12249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17487 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23688 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26699 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g28143 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33240 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50065 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51387 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27069 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 113 160
IPR002885 Pentatricopeptide_repeat 216 262
IPR002885 Pentatricopeptide_repeat 12 58
IPR002885 Pentatricopeptide_repeat 191 213
No external refs found!