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  5. Lfl_g11894

Lfl_g11894 (OTP86)


Aliases : OTP86

Description : not classified & original description: none


Gene families : OG0011978 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0011978_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g11894
Cluster HCCA: Cluster_394

Target Alias Description ECC score Gene Family Method Actions
Lfl_g08961 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 561 586
IPR046848 E_motif 810 872
IPR002885 Pentatricopeptide_repeat 160 185
IPR002885 Pentatricopeptide_repeat 667 692
IPR002885 Pentatricopeptide_repeat 263 287
IPR002885 Pentatricopeptide_repeat 291 320
IPR002885 Pentatricopeptide_repeat 327 353
IPR002885 Pentatricopeptide_repeat 767 792
IPR002885 Pentatricopeptide_repeat 693 739
IPR002885 Pentatricopeptide_repeat 186 223
IPR002885 Pentatricopeptide_repeat 389 436
IPR002885 Pentatricopeptide_repeat 84 132
IPR002885 Pentatricopeptide_repeat 490 537
No external refs found!