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  5. Aop_g32553

Aop_g32553 (SHI)


Aliases : SHI

Description : SRS-type transcription factor & original description: none


Gene families : OG0001235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001235_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g32553
Cluster HCCA: Cluster_308

Target Alias Description ECC score Gene Family Method Actions
AT5G12330 LRP1 Lateral root primordium (LRP) protein-related 0.02 OrthoFinder output from all 47 species
Adi_g045239 SRS7 SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g061023 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079599 SRS1, STY1 SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079607 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085909 SRS1, STY1 SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106034 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009812001 SRS5 RNA biosynthesis.transcriptional activation.SRS... 0.03 OrthoFinder output from all 47 species
GSVIVT01037267001 No alias RNA biosynthesis.transcriptional activation.SRS... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013968 SHI SRS-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Solyc02g084680.3.1 SRS1, STY1,... transcription factor (SRS) 0.02 OrthoFinder output from all 47 species
Solyc10g054070.1.1 SRS5, Solyc10g054070 transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Solyc11g064800.3.1 LRP1, Solyc11g064800 transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Zm00001e026854_P001 SHI, Zm00001e026854 transcription factor (SRS) 0.02 OrthoFinder output from all 47 species
Zm00001e031567_P001 LRP1, Zm00001e031567 transcription factor (SRS) 0.02 OrthoFinder output from all 47 species
Zm00001e034798_P001 SRS1, STY1,... transcription factor (SRS) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!