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  5. Aop_g32260

Aop_g32260 (EXP9, EXPA9, ATEXP9,...)


Aliases : EXP9, EXPA9, ATEXP9, ATEXPA9, ATHEXP ALPHA 1.10

Description : alpha-class expansin & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g32260
Cluster HCCA: Cluster_395

Target Alias Description ECC score Gene Family Method Actions
Aob_g20979 EXPB3, ATEXPB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12260 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13184 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33546 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g41940 ATEXP14, EXPA14,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g09346 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G104900.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.10G048600.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G041300.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.25G024500.1 EXPA16, ATHEXP... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g30034 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31511 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01004469001 No alias Expansin-like B1 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01004595001 ATHEXP BETA 3.1,... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.05 OrthoFinder output from all 47 species
Gb_04404 EXP15, ATEXPA15,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Gb_24808 ATEXLA1, EXPL1,... alpha-like-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os04g44780.1 EXPB3, ATEXPB3,... Expansin-B17 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os05g19570.1 LOC_Os05g19570 alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os10g40710.1 ATHEXP BETA 1.4,... Expansin-B2 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Len_g15335 EXPB3, ATEXPB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10433559g0020 ATEXPA11, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
MA_134413g0010 ATHEXP ALPHA... alpha-class expansin 0.04 OrthoFinder output from all 47 species
MA_651027g0010 ATHEXP ALPHA... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp3g03970.1 EXP15, ATEXPA15,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp3g09750.1 ATEXPA1, EXP1,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Msp_g31974 ATEXPA10,... alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g37532 EXPA8, ATHEXP... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28493 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.08 OrthoFinder output from all 47 species
Pp3c21_1850V3.1 ATEXPA10,... expansin A1 0.02 OrthoFinder output from all 47 species
Ppi_g08562 EXPB3, ATEXPB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30056 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31444 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g007780.3.1 EXPA18, EXP18,... Putative expansin-A30 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Solyc08g080060.4.1 ATEXP7, EXPA7,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Spa_g17657 ATEXPA10,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g21671 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37473 EXPA8, ATHEXP... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g38496 ATEXPA10,... alpha-class expansin & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g40846 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48546 ATEXPA10,... alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e037879_P001 ATHEXP BETA 1.4,... Expansin-B3 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e037885_P001 ATHEXP BETA 1.4,... Expansin-B6 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 241 318
IPR009009 RlpA-like_DPBB 143 230
No external refs found!