Aop_g32159

Description : component *(eL36) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0000800 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000800_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g32159
Cluster	HCCA: Cluster_66

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00179170	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.06	OrthoFinder output from all 47 species
AT2G37600	No alias	Ribosomal protein L36e family protein	0.06	OrthoFinder output from all 47 species
AT3G53740	No alias	Ribosomal protein L36e family protein	0.1	OrthoFinder output from all 47 species
AT5G02450	No alias	Ribosomal protein L36e family protein	0.08	OrthoFinder output from all 47 species
Adi_g012236	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Adi_g067485	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Aop_g16043	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.09	OrthoFinder output from all 47 species
Azfi_s0049.g030800	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Azfi_s0383.g067431	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Cba_g76479	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021493.69	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.06	OrthoFinder output from all 47 species
Cre12.g484050	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.12	OrthoFinder output from all 47 species
Dac_g01113	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dac_g25734	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 47 species
Dcu_g17175	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.08	OrthoFinder output from all 47 species
Ehy_g04197	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
GSVIVT01026914001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.06	OrthoFinder output from all 47 species
GSVIVT01028917001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.05	OrthoFinder output from all 47 species
Gb_10248	No alias	component RPL36 of LSU proteome component	0.06	OrthoFinder output from all 47 species
Gb_27261	No alias	component RPL36 of LSU proteome component	0.07	OrthoFinder output from all 47 species
LOC_Os01g62350.1	LOC_Os01g62350	component RPL36 of LSU proteome component	0.08	OrthoFinder output from all 47 species
LOC_Os05g38520.1	LOC_Os05g38520	component RPL36 of LSU proteome component	0.09	OrthoFinder output from all 47 species
Lfl_g31817	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Lfl_g38888	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
MA_10430792g0010	No alias	component RPL36 of LSU proteome component	0.07	OrthoFinder output from all 47 species
MA_69756g0010	No alias	component RPL36 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Mp1g05460.1	No alias	component RPL36 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Msp_g00137	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Msp_g34913	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Msp_g37785	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Nbi_g39400	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pir_g05044	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pir_g07917	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pp3c14_19960V3.1	Pp3c14_19960	Ribosomal protein L36e family protein	0.07	OrthoFinder output from all 47 species
Pp3c1_32310V3.1	Pp3c1_32310	Ribosomal protein L36e family protein	0.06	OrthoFinder output from all 47 species
Ppi_g25844	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ppi_g28256	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Ppi_g33926	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004334	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Sam_g07231	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Sam_g20358	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g23436	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Sam_g23546	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g31192	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Sam_g41738	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g46575	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Sam_g48487	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.1	OrthoFinder output from all 47 species
Smo267958	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
Smo439710	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
Solyc03g025520.4.1	Solyc03g025520	component RPL36 of LSU proteome component	0.06	OrthoFinder output from all 47 species
Solyc06g036050.4.1	Solyc06g036050	component RPL36 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Spa_g03176	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Spa_g03177	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 47 species
Spa_g44897	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Zm00001e027238_P001	Zm00001e027238	component RPL36 of LSU proteome component	0.11	OrthoFinder output from all 47 species
Zm00001e031832_P002	Zm00001e031832	component RPL36 of LSU proteome component	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
MF	GO:0003779	actin binding	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
BP	GO:0006417	regulation of translation	IEP	HCCA
BP	GO:0006448	regulation of translational elongation	IEP	HCCA
BP	GO:0006449	regulation of translational termination	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
BP	GO:0007155	cell adhesion	IEP	HCCA
BP	GO:0007160	cell-matrix adhesion	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
BP	GO:0009891	positive regulation of biosynthetic process	IEP	HCCA
BP	GO:0009893	positive regulation of metabolic process	IEP	HCCA
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	HCCA
BP	GO:0010628	positive regulation of gene expression	IEP	HCCA
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0031589	cell-substrate adhesion	IEP	HCCA
BP	GO:0034248	regulation of amide metabolic process	IEP	HCCA
BP	GO:0034250	positive regulation of amide metabolic process	IEP	HCCA
MF	GO:0043021	ribonucleoprotein complex binding	IEP	HCCA
MF	GO:0043022	ribosome binding	IEP	HCCA
BP	GO:0043243	positive regulation of protein-containing complex disassembly	IEP	HCCA
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
BP	GO:0045727	positive regulation of translation	IEP	HCCA
BP	GO:0045901	positive regulation of translational elongation	IEP	HCCA
BP	GO:0045905	positive regulation of translational termination	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048522	positive regulation of cellular process	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051130	positive regulation of cellular component organization	IEP	HCCA
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
BP	GO:0051247	positive regulation of protein metabolic process	IEP	HCCA
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000509	Ribosomal_L36e	4	93

External Links

No external refs found!

Aop_g32159

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation