Aop_g31638


Description : component *(eS26) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001368 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001368_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g31638
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00042770 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
AT2G40590 No alias Ribosomal protein S26e family protein 0.03 OrthoFinder output from all 47 species
AT3G56340 No alias Ribosomal protein S26e family protein 0.02 OrthoFinder output from all 47 species
Aop_g22616 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001486.9 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Cre16.g682300 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
Dac_g16013 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 47 species
Dac_g27155 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.14 OrthoFinder output from all 47 species
Dac_g33608 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Dde_g10628 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01032696001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
LOC_Os01g60790.1 LOC_Os01g60790 component RPS26 of SSU proteome 0.02 OrthoFinder output from all 47 species
LOC_Os05g39960.1 LOC_Os05g39960 component RPS26 of SSU proteome 0.02 OrthoFinder output from all 47 species
Len_g00840 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Lfl_g15449 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
MA_114136g0010 No alias component RPS26 of SSU proteome 0.02 OrthoFinder output from all 47 species
MA_74546g0010 No alias component RPS26 of SSU proteome 0.02 OrthoFinder output from all 47 species
Mp2g06210.1 No alias component RPS26 of SSU proteome 0.04 OrthoFinder output from all 47 species
Pir_g06425 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Pp3c5_16070V3.1 Pp3c5_16070 Ribosomal protein S26e family protein 0.02 OrthoFinder output from all 47 species
Pp3c6_8910V3.1 Pp3c6_8910 Ribosomal protein S26e family protein 0.02 OrthoFinder output from all 47 species
Ppi_g42559 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Sam_g05476 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Sam_g15700 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Sam_g47002 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Smo77589 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Spa_g36890 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e011780_P001 Zm00001e011780 component RPS26 of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e027298_P001 Zm00001e027298 component RPS26 of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0051015 actin filament binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000892 Ribosomal_S26e 28 134
No external refs found!