1. Home
  2. Species
  3. Amblovenatum opulentum
  4. Sequence
  5. Aop_g31491

Aop_g31491 (GTB1)


Aliases : GTB1

Description : component *(SPT6) of SPT6-IWS1 transcription elongation complex & original description: none


Gene families : OG0001807 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001807_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g31491

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00136890 GTB1,... Chromatin organisation.histone chaperone... 0.02 OrthoFinder output from all 47 species
AT1G65440 GTB1 global transcription factor group B1 0.07 OrthoFinder output from all 47 species
Adi_g055496 GTB1 component *(SPT6) of SPT6-IWS1 transcription elongation... 0.05 OrthoFinder output from all 47 species
Aev_g43821 GTB1 component *(SPT6) of SPT6-IWS1 transcription elongation... 0.07 OrthoFinder output from all 47 species
Ala_g25347 GTB1 component *(SPT6) of SPT6-IWS1 transcription elongation... 0.08 OrthoFinder output from all 47 species
Ala_g37718 No alias component *(SPT6) of SPT6-IWS1 transcription elongation... 0.06 OrthoFinder output from all 47 species
Als_g61446 GTB1 component *(SPT6) of SPT6-IWS1 transcription elongation... 0.03 OrthoFinder output from all 47 species
Aob_g17694 GTB1 component *(SPT6) of SPT6-IWS1 transcription elongation... 0.06 OrthoFinder output from all 47 species
Aob_g20381 No alias component *(SPT6) of SPT6-IWS1 transcription elongation... 0.05 OrthoFinder output from all 47 species
Azfi_s0351.g066576 GTB1 component *(SPT6) of SPT6-IWS1 transcription elongation... 0.02 OrthoFinder output from all 47 species
Ceric.21G005900.1 GTB1, Ceric.21G005900 component *(SPT6) of SPT6-IWS1 transcription elongation... 0.05 OrthoFinder output from all 47 species
Ceric.30G057400.1 Ceric.30G057400 component *(SPT6) of SPT6-IWS1 transcription elongation... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001486.8 GTB1 Chromatin organisation.histone chaperone... 0.03 OrthoFinder output from all 47 species
Cre09.g403182 GTB1 Chromatin organisation.histone chaperone... 0.04 OrthoFinder output from all 47 species
Dac_g22241 GTB1 component *(SPT6) of SPT6-IWS1 transcription elongation... 0.02 OrthoFinder output from all 47 species
Dcu_g14255 GTB1 component *(SPT6) of SPT6-IWS1 transcription elongation... 0.08 OrthoFinder output from all 47 species
Dcu_g19973 GTB1 component *(SPT6) of SPT6-IWS1 transcription elongation... 0.04 OrthoFinder output from all 47 species
Ehy_g22602 GTB1 component *(SPT6) of SPT6-IWS1 transcription elongation... 0.03 OrthoFinder output from all 47 species
Ehy_g23609 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025815001 GTB1 Chromatin organisation.histone chaperone... 0.05 OrthoFinder output from all 47 species
Gb_29261 GTB1 histone chaperone (SPT6). component SPT6 of SPT6-IWS1... 0.04 OrthoFinder output from all 47 species
LOC_Os05g41510.1 GTB1, LOC_Os05g41510 histone chaperone (SPT6). component SPT6 of SPT6-IWS1... 0.02 OrthoFinder output from all 47 species
Len_g19196 GTB1 component *(SPT6) of SPT6-IWS1 transcription elongation... 0.07 OrthoFinder output from all 47 species
Lfl_g05758 GTB1 component *(SPT6) of SPT6-IWS1 transcription elongation... 0.03 OrthoFinder output from all 47 species
MA_13648g0020 GTB1 histone chaperone (SPT6). component SPT6 of SPT6-IWS1... 0.03 OrthoFinder output from all 47 species
Mp2g25720.1 GTB1 histone chaperone (SPT6). component SPT6 of SPT6-IWS1... 0.08 OrthoFinder output from all 47 species
Nbi_g05486 GTB1 component *(SPT6) of SPT6-IWS1 transcription elongation... 0.09 OrthoFinder output from all 47 species
Ore_g08934 GTB1 component *(SPT6) of SPT6-IWS1 transcription elongation... 0.05 OrthoFinder output from all 47 species
Pir_g01697 GTB1 component *(SPT6) of SPT6-IWS1 transcription elongation... 0.04 OrthoFinder output from all 47 species
Pir_g03432 No alias component *(SPT6) of SPT6-IWS1 transcription elongation... 0.02 OrthoFinder output from all 47 species
Ppi_g31322 GTB1 component *(SPT6) of SPT6-IWS1 transcription elongation... 0.02 OrthoFinder output from all 47 species
Sam_g13993 No alias component *(SPT6) of SPT6-IWS1 transcription elongation... 0.05 OrthoFinder output from all 47 species
Smo164675 GTB1 Chromatin organisation.histone chaperone... 0.02 OrthoFinder output from all 47 species
Solyc10g081020.2.1 GTB1, Solyc10g081020 histone chaperone (SPT6). component SPT6 of SPT6-IWS1... 0.04 OrthoFinder output from all 47 species
Spa_g16432 GTB1 component *(SPT6) of SPT6-IWS1 transcription elongation... 0.05 OrthoFinder output from all 47 species
Tin_g02913 GTB1 component *(SPT6) of SPT6-IWS1 transcription elongation... 0.05 OrthoFinder output from all 47 species
Tin_g21814 No alias component *(SPT6) of SPT6-IWS1 transcription elongation... 0.03 OrthoFinder output from all 47 species
Zm00001e032018_P003 GTB1, Zm00001e032018 histone chaperone (SPT6). component SPT6 of SPT6-IWS1... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR028231 Spt6_YqgF 748 902
IPR032706 Spt6_HHH 906 1008
IPR035420 Spt6_SH2 1244 1453
IPR041692 HHH_9 1022 1114
IPR028083 Spt6_acidic_N_dom 30 124
No external refs found!