1. Home
  2. Species
  3. Amblovenatum opulentum
  4. Sequence
  5. Aop_g31194

Aop_g31194


Description : LIM-type transcription factor & original description: none


Gene families : OG0001474 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001474_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g31194
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Als_g22072 No alias LIM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g16417 No alias LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20012 WLIM1 LIM-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g05833 No alias LIM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23314 No alias LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
InterPro domains Description Start Stop
IPR001781 Znf_LIM 6 58
No external refs found!