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  5. Aop_g30126

Aop_g30126


Description : not classified & original description: none


Gene families : OG0012787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012787_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g30126

Target Alias Description ECC score Gene Family Method Actions
Als_g07329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010880 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2943 0.02 OrthoFinder output from all 47 species
Dac_g07542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31659 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g05613 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 590 638
IPR002885 Pentatricopeptide_repeat 691 729
IPR002885 Pentatricopeptide_repeat 387 433
IPR002885 Pentatricopeptide_repeat 287 333
IPR002885 Pentatricopeptide_repeat 490 535
IPR002885 Pentatricopeptide_repeat 88 115
IPR002885 Pentatricopeptide_repeat 188 217
IPR002885 Pentatricopeptide_repeat 160 185
IPR002885 Pentatricopeptide_repeat 865 891
IPR002885 Pentatricopeptide_repeat 902 924
IPR002885 Pentatricopeptide_repeat 261 281
IPR002885 Pentatricopeptide_repeat 831 852
IPR002885 Pentatricopeptide_repeat 666 689
No external refs found!