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  5. Aop_g29988

Aop_g29988


Description : EC_2.7 transferase transferring phosphorus-containing group & original description: none


Gene families : OG0002534 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002534_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g29988
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00113p00140210 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.ribonuclease... 0.03 OrthoFinder output from all 47 species
AT5G14580 No alias polyribonucleotide nucleotidyltransferase, putative 0.02 OrthoFinder output from all 47 species
Als_g03851 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Cba_g17083 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ceric.25G023900.1 Ceric.25G023900 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Cre04.g214501 RIF10, PNP RNA processing.organelle machineries.ribonuclease... 0.02 OrthoFinder output from all 47 species
Ehy_g04014 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
GSVIVT01032436001 No alias RNA processing.organelle machineries.ribonuclease... 0.02 OrthoFinder output from all 47 species
Gb_15670 RIF10, PNP polynucleotide phosphorylase (PNP) 0.02 OrthoFinder output from all 47 species
LOC_Os02g40460.1 LOC_Os02g40460 polynucleotide phosphorylase (PNP) 0.04 OrthoFinder output from all 47 species
LOC_Os07g07310.1 RIF10, PNP,... polynucleotide phosphorylase (PNP) 0.05 OrthoFinder output from all 47 species
MA_10434926g0010 No alias Polyribonucleotide nucleotidyltransferase 2,... 0.03 OrthoFinder output from all 47 species
Sam_g09102 No alias EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Smo84724 No alias RNA processing.organelle machineries.ribonuclease... 0.02 OrthoFinder output from all 47 species
Solyc02g086600.3.1 Solyc02g086600 polynucleotide phosphorylase (PNP) 0.02 OrthoFinder output from all 47 species
Zm00001e015113_P001 Zm00001e015113 polynucleotide phosphorylase (PNP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 633 688
IPR001247 ExoRNase_PH_dom1 391 524
IPR001247 ExoRNase_PH_dom1 83 210
IPR015847 ExoRNase_PH_dom2 213 275
IPR003029 S1_domain 695 758
IPR015848 PNPase_PH_RNA-bd_bac/org-type 308 388
No external refs found!