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  5. Aop_g29880

Aop_g29880 (UBP12)


Aliases : UBP12

Description : not classified & original description: none


Gene families : OG0005085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g29880

Target Alias Description ECC score Gene Family Method Actions
Adi_g107348 UBP12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g33294 UBP12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06394 UBP12 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g57720 UBP12 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.15G071100.1 UBP12, Ceric.15G071100 not classified & original description: pacid=50640759... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021281.14 No alias Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dac_g27627 UBP12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g23057 UBP12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18112 UBP12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_35991 UBP12 Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g13952 UBP13 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11501 UBP12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436921g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_1628982g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_17762g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g26173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g49066 UBP12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020740 UBP12 not classified & original description: CDS=294-7754 0.03 OrthoFinder output from all 47 species
Smo447032 UBP12 Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
Spa_g09112 UBP12 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR021905 DUF3517 2107 2370
IPR001394 Peptidase_C19_UCH 1548 1915
No external refs found!