Aop_g29613 (COL1, ATCOL1)

Aliases : COL1, ATCOL1

Description : floral promoter *(CONSTANS) & original description: none

Gene families : OG0001141 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001141_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g29613

Target	Alias	Description	ECC score	Gene Family Method
Aob_g05765	ATCOL4, COL4	floral promoter *(CONSTANS) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0006.g009656	ATCOL4, COL4	floral promoter *(CONSTANS) & original description: CDS=186-1232	0.03	OrthoFinder output from all 47 species
Spa_g06394	ATCOL4, COL4	floral promoter *(CONSTANS) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e039922_P001	COL3, ATCOL3,...	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR010402	CCT_domain	361	403
IPR000315	Znf_B-box	105	150

External Links

No external refs found!