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  5. Aop_g29362

Aop_g29362 (SBP1)


Aliases : SBP1

Description : not classified & original description: none


Gene families : OG0004163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004163_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g29362
Cluster HCCA: Cluster_315

Target Alias Description ECC score Gene Family Method Actions
Aob_g04196 SBP2, EDA38 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25872 SBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G045500.1 SBP3, Ceric.12G045500 not classified & original description: pacid=50600936... 0.03 OrthoFinder output from all 47 species
Ceric.1Z244500.1 SBP2, EDA38,... not classified & original description: pacid=50606320... 0.03 OrthoFinder output from all 47 species
Dac_g09983 SBP2, EDA38 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01021049001 SBP1 Selenium-binding protein 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Msp_g12342 SBP2, EDA38 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g092430.3.1 SBP2, EDA38,... Selenium-binding protein 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008430 selenium binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR008826 Se-bd 10 475
No external refs found!