Aop_g29338

Description : not classified & original description: none

Gene families : OG0013233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0013233_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g29338
Cluster	HCCA: Cluster_327

Target	Alias	Description	ECC score	Gene Family Method
Als_g18518	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.24G022000.1	Ceric.24G022000	not classified & original description: pacid=50628904...	0.04	OrthoFinder output from all 47 species
Dde_g30316	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g24927	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g63900	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g29228	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	349	371
IPR002885	Pentatricopeptide_repeat	581	610
IPR002885	Pentatricopeptide_repeat	780	826
IPR002885	Pentatricopeptide_repeat	173	219
IPR002885	Pentatricopeptide_repeat	678	718
IPR002885	Pentatricopeptide_repeat	375	422
IPR002885	Pentatricopeptide_repeat	72	119
IPR002885	Pentatricopeptide_repeat	476	523
IPR002885	Pentatricopeptide_repeat	273	320

External Links

No external refs found!