AMTR_s00002p00186590 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.163

Description : RNA biosynthesis.transcriptional activation.ARR-B transcription factor


Gene families : OG_01_0000192 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000192_tree ,
OG_02_0041283 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0035728 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00186590
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00251530 evm_27.TU.AmTr_v1... Multi-process regulation.circadian clock.evening element... 0.09 Archaeplastida
AMTR_s00049p00081480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.ARR-B... 0.02 Archaeplastida
AT1G49190 ARR19, RR19 response regulator 19 0.02 Archaeplastida
AT1G67710 ARR11 response regulator 11 0.03 Archaeplastida
AT2G01760 RR14, ARR14 response regulator 14 0.03 Archaeplastida
AT3G62670 RR20, MEE41, ARR20 response regulator 20 0.01 Archaeplastida
Cre02.g083750 No alias Transcription factor BOA OS=Arabidopsis thaliana 0.08 Archaeplastida
GSVIVT01010627001 No alias RNA biosynthesis.transcriptional activation.ARR-B... 0.03 Archaeplastida
GSVIVT01025785001 No alias No description available 0.04 Archaeplastida
GSVIVT01029177001 No alias RNA biosynthesis.transcriptional activation.ARR-B... 0.01 Archaeplastida
MA_114951g0010 No alias B-type cytokinin ARR response activator. transcription... 0.01 Archaeplastida
MA_17547g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_601142g0010 No alias B-type cytokinin ARR response activator. transcription... 0.01 Archaeplastida
MA_7459g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_92689g0020 No alias B-type cytokinin ARR response activator. transcription... 0.03 Archaeplastida
Solyc01g065540.3.1 No alias B-type cytokinin ARR response activator. transcription... 0.03 Archaeplastida
Solyc07g005140.4.1 No alias B-type cytokinin ARR response activator. transcription... 0.03 Archaeplastida
Zm00001e013844_P002 No alias B-type cytokinin ARR response activator. transcription... 0.02 Archaeplastida
Zm00001e028539_P002 No alias B-type cytokinin ARR response activator. transcription... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0003682 chromatin binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001005 SANT/Myb 231 281
IPR001789 Sig_transdc_resp-reg_receiver 21 129
No external refs found!