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  5. Aop_g28921

Aop_g28921 (FD1, ATFD1)


Aliases : FD1, ATFD1

Description : ferredoxin targeted to NADP reduction & original description: none


Gene families : OG0000635 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000635_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g28921
Cluster HCCA: Cluster_278

Target Alias Description ECC score Gene Family Method Actions
Aev_g42524 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Als_g59282 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.09 OrthoFinder output from all 47 species
Aop_g15655 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Ceric.13G078000.1 FD1, ATFD1,... ferredoxin targeted to NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Lfl_g08393 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.12 OrthoFinder output from all 47 species
Lfl_g15099 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.07 OrthoFinder output from all 47 species
Lfl_g20268 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Mp2g15250.1 FD1, ATFD1 ferredoxin electron carrier 0.02 OrthoFinder output from all 47 species
Pnu_g29158 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.11 OrthoFinder output from all 47 species
Ppi_g00520 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Ppi_g19342 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Ppi_g20441 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Solyc10g044520.3.1 FED A, ATFD2,... ferredoxin electron carrier 0.03 OrthoFinder output from all 47 species
Zm00001e029127_P002 FED A, ATFD2,... ferredoxin electron carrier 0.02 OrthoFinder output from all 47 species
Zm00001e029128_P001 FED A, ATFD2,... ferredoxin electron carrier 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001041 2Fe-2S_ferredoxin-type 55 127
No external refs found!