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  5. Lfl_g11501

Lfl_g11501 (UBP12)


Aliases : UBP12

Description : not classified & original description: none


Gene families : OG0005085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005085_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g11501
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
Adi_g107348 UBP12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g33294 UBP12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06394 UBP12 not classified & original description: none 0.13 OrthoFinder output from all 47 species
Als_g57720 UBP12 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g29880 UBP12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23681.t1 Aspi01Gene23681 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene23682.t2 UBP12, Aspi01Gene23682 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene57571.t2 Aspi01Gene57571 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010362 UBP12 not classified & original description: CDS=350-7828 0.05 OrthoFinder output from all 47 species
Cba_g11482 UBP13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.15G071100.1 UBP12, Ceric.15G071100 not classified & original description: pacid=50640759... 0.08 OrthoFinder output from all 47 species
Dcu_g23057 UBP12 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dde_g12126 UBP12 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g18112 UBP12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10436921g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_1628982g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_17762g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_6934376g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g42753 UBP12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07531 UBP12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04257 MED8 component *(MED8) of head module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Ppi_g49066 UBP12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020740 UBP12 not classified & original description: CDS=294-7754 0.06 OrthoFinder output from all 47 species
Smo447032 UBP12 Protein degradation.peptidase families.cysteine-type... 0.07 OrthoFinder output from all 47 species
Spa_g09112 UBP12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13986 UBP12 not classified & original description: none 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR021905 DUF3517 2131 2411
IPR001394 Peptidase_C19_UCH 1578 1945
No external refs found!