Aop_g28422 (AMY3, ATAMY3)

Aliases : AMY3, ATAMY3

Description : alpha amylase & original description: none

Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g28422
Cluster	HCCA: Cluster_131

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene38425.t1	AMY2, ATAMY2,...	alpha amylase & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene40723.t1	AMY3, ATAMY3,...	alpha amylase & original description: none	0.03	OrthoFinder output from all 47 species
Gb_30448	AMY1, ATAMY1	alpha amylase	0.03	OrthoFinder output from all 47 species
LOC_Os01g25510.1	AMY1, ATAMY1,...	Alpha-amylase isozyme C OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
LOC_Os02g52710.1	AMY1, ATAMY1,...	alpha amylase	0.02	OrthoFinder output from all 47 species
LOC_Os06g49970.2	AMY1, ATAMY1,...	alpha amylase	0.02	OrthoFinder output from all 47 species
LOC_Os09g28400.1	AMY1, ATAMY1,...	alpha amylase	0.02	OrthoFinder output from all 47 species
LOC_Os09g28420.1	AMY1, ATAMY1,...	alpha amylase	0.03	OrthoFinder output from all 47 species
Len_g01238	AMY2, ATAMY2	alpha amylase & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR012850	A-amylase_bs_C	920	982
IPR006047	Glyco_hydro_13_cat_dom	618	899

External Links

No external refs found!