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  5. Aop_g28081

Aop_g28081


Description : not classified & original description: none


Gene families : OG0000505 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000505_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g28081

Target Alias Description ECC score Gene Family Method Actions
Adi_g002017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0509.g074704 TMN1, AtTMN1 not classified & original description: CDS=1-1740 0.02 OrthoFinder output from all 47 species
Cre14.g611850 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre16.g675958 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Ehy_g09821 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g34690.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os12g07670.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_334563g0010 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_52574g0010 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g24435 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13530 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g103930.3.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g07507 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47696 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014799_P002 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004240 EMP70 54 543
No external refs found!