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  5. Aop_g27850

Aop_g27850


Description : not classified & original description: none


Gene families : OG0000562 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000562_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g27850
Cluster HCCA: Cluster_284

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00176860 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
AMTR_s03609p00005290 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Ceric.12G054700.1 Ceric.12G054700 solute transporter *(AAAP) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.29G066800.1 Ceric.29G066800 solute transporter *(AAAP) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g14784 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11069 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g117350.1.1 Solyc03g117350 solute transporter (AAAP) 0.04 OrthoFinder output from all 47 species
Tin_g03316 No alias solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03380 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e036819_P002 Zm00001e036819 solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!