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  5. Aop_g27540

Aop_g27540


Description : not classified & original description: none


Gene families : OG0000510 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000510_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g27540

Target Alias Description ECC score Gene Family Method Actions
Adi_g011762 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g018998 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g054757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38619 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g46885 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02025 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20353.t1 Aspi01Gene20353 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene30003.t1 Aspi01Gene30003 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67042.t1 Aspi01Gene67042 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25311 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g69297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G014500.1 Ceric.17G014500 not classified & original description: pacid=50617361... 0.03 OrthoFinder output from all 47 species
Dac_g22991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02435 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g04517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g30300.1 LOC_Os02g30300 F-box protein At1g67340 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g31610.1 LOC_Os04g31610 F-box protein At1g67340 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g29710.1 LOC_Os11g29710 F-box protein At1g67340 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g19272 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g08620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01939 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03690 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g02374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12894 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g31251 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009923 No alias not classified & original description: CDS=105-1622 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021897 No alias not classified & original description: CDS=923-2077 0.03 OrthoFinder output from all 47 species
Sam_g36277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29425 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51464 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04573 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008883 glutamyl-tRNA reductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002893 Znf_MYND 473 513
No external refs found!