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  5. Aop_g27368

Aop_g27368


Description : not classified & original description: none


Gene families : OG0006499 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006499_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g27368
Cluster HCCA: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00020p00012640 evm_27.TU.AmTr_v1... 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea 0.07 OrthoFinder output from all 47 species
AT3G23700 No alias Nucleic acid-binding proteins superfamily 0.13 OrthoFinder output from all 47 species
Aev_g03265 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g04569 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Als_g08286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01702 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene14361.t1 Aspi01Gene14361 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0534.g076070 No alias not classified & original description: CDS=250-1461 0.08 OrthoFinder output from all 47 species
Cba_g16549 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.11G080900.1 Ceric.11G080900 not classified & original description: pacid=50596374... 0.05 OrthoFinder output from all 47 species
Cre03.g148950 No alias 30S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g02753 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g03799 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g07957 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g01039 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01031632001 No alias 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea 0.1 OrthoFinder output from all 47 species
Gb_13624 No alias 30S ribosomal protein S1, chloroplastic OS=Spinacia... 0.07 OrthoFinder output from all 47 species
LOC_Os03g62780.1 LOC_Os03g62780 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Len_g12635 No alias not classified & original description: none 0.18 OrthoFinder output from all 47 species
Lfl_g01511 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_37826g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp6g19820.1 No alias 30S ribosomal protein S1, chloroplastic OS=Spinacia... 0.04 OrthoFinder output from all 47 species
Msp_g04843 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
Nbi_g02820 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g26841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40824 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g12492 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Pnu_g01274 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g05108 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Sam_g30081 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g39278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo96268 No alias 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea 0.03 OrthoFinder output from all 47 species
Spa_g11144 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Tin_g18988 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g23785 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e006347_P003 Zm00001e006347 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003029 S1_domain 102 175
IPR003029 S1_domain 189 265
No external refs found!