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  5. Aop_g27193

Aop_g27193


Description : not classified & original description: none


Gene families : OG0000527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000527_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Aop_g27193

Target Alias Description ECC score Gene Family Method Actions
Adi_g086567 No alias substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aob_g01357 SKIP1 substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Aob_g02182 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ceric.02G023100.1 Ceric.02G023100 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Dde_g26536 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Msp_g10781 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ore_g10621 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Pir_g09613 SKIP1 substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.03 OrthoFinder output from all 47 species
Pir_g18715 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ppi_g08863 FBW2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g52224 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Solyc08g006940.4.1 Solyc08g006940 F-box protein SKIP19 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g15037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00863 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquiTin ligase... 0.03 OrthoFinder output from all 47 species
Tin_g12852 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquiTin ligase... 0.03 OrthoFinder output from all 47 species
Tin_g45831 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005956 protein kinase CK2 complex IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0030490 maturation of SSU-rRNA IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030686 90S preribosome IEP HCCA
CC GO:0030688 preribosome, small subunit precursor IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 220 238
No external refs found!