AMTR_s00022p00253450 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00022.400

Description : Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.CCD carotenoid cleavage dioxygenase


Gene families : OG_01_0000267 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000267_tree ,
OG_02_0003817 (LandPlants) Phylogenetic Tree(s): OG_02_0003817_tree ,
OG_03_0004867 (SeedPlants) Phylogenetic Tree(s): OG_03_0004867_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00022p00253450
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AT3G63520 ATCCD1, CCD1,... carotenoid cleavage dioxygenase 1 0.04 Archaeplastida
Cpa|evm.model.tig00001128.6 No alias No description available 0.03 Archaeplastida
Cre03.g149650 No alias Carotenoid 9,10(9,10)-cleavage dioxygenase 1... 0.02 Archaeplastida
GSVIVT01032103001 No alias Secondary metabolism.terpenoids.terpenoid... 0.04 Archaeplastida
Gb_04986 No alias carotenoid cleavage dioxygenase (CCD4) 0.03 Archaeplastida
LOC_Os02g47510.1 No alias carotenoid cleavage dioxygenase (CCD4) 0.03 Archaeplastida
LOC_Os12g44310.1 No alias carotenoid cleavage dioxygenase (CCD1) 0.03 Archaeplastida
MA_10425950g0010 No alias carotenoid cleavage dioxygenase (CCD4) 0.02 Archaeplastida
MA_906445g0010 No alias No annotation 0.03 Archaeplastida
Mp7g12990.1 No alias carotenoid cleavage dioxygenase (CCD1) 0.02 Archaeplastida
Pp3c21_12920V3.1 No alias carotenoid cleavage dioxygenase 1 0.03 Archaeplastida
Pp3c22_6380V3.1 No alias carotenoid cleavage dioxygenase 1 0.02 Archaeplastida
Smo272067 No alias Secondary metabolism.terpenoids.terpenoid... 0.02 Archaeplastida
Smo91815 No alias Secondary metabolism.terpenoids.terpenoid... 0.02 Archaeplastida
Smo94524 No alias 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic... 0.03 Archaeplastida
Solyc08g075480.4.1 No alias carotenoid cleavage dioxygenase (CCD4) 0.02 Archaeplastida
Zm00001e011508_P001 No alias neoxanthin cleavage protein 0.03 Archaeplastida
Zm00001e038960_P002 No alias carotenoid cleavage dioxygenase (CCD1) 0.02 Archaeplastida
AT3G63520 ATCCD1, CCD1,... carotenoid cleavage dioxygenase 1 0.04 LandPlants
LOC_Os12g44310.1 No alias carotenoid cleavage dioxygenase (CCD1) 0.03 LandPlants
MA_906445g0010 No alias No annotation 0.02 LandPlants
Mp7g12990.1 No alias carotenoid cleavage dioxygenase (CCD1) 0.02 LandPlants
Pp3c21_12920V3.1 No alias carotenoid cleavage dioxygenase 1 0.03 LandPlants
Pp3c22_6380V3.1 No alias carotenoid cleavage dioxygenase 1 0.02 LandPlants
Smo272067 No alias Secondary metabolism.terpenoids.terpenoid... 0.02 LandPlants
Zm00001e038960_P002 No alias carotenoid cleavage dioxygenase (CCD1) 0.02 LandPlants
AT3G63520 ATCCD1, CCD1,... carotenoid cleavage dioxygenase 1 0.04 SeedPlants
LOC_Os12g44310.1 No alias carotenoid cleavage dioxygenase (CCD1) 0.03 SeedPlants
Zm00001e038960_P002 No alias carotenoid cleavage dioxygenase (CCD1) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 49 531
No external refs found!