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  5. Aop_g26472

Aop_g26472 (ATLEUC1, IIL1)


Aliases : ATLEUC1, IIL1

Description : large subunit of methylthioalkylmalate isomerase & original description: none


Gene families : OG0002600 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002600_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g26472
Cluster HCCA: Cluster_269

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00083280 ATLEUC1, IIL1,... Secondary metabolism.nitrogen-containing secondary... 0.03 OrthoFinder output from all 47 species
Aob_g17147 ATLEUC1, IIL1 large subunit of methylthioalkylmalate isomerase &... 0.03 OrthoFinder output from all 47 species
Azfi_s0157.g053783 ATLEUC1, IIL1 large subunit of methylthioalkylmalate isomerase &... 0.03 OrthoFinder output from all 47 species
MA_10427782g0010 ATLEUC1, IIL1 large subunit of isopropylmalate isomerase heterodimer.... 0.03 OrthoFinder output from all 47 species
MA_10430943g0010 ATLEUC1, IIL1 large subunit of isopropylmalate isomerase heterodimer.... 0.03 OrthoFinder output from all 47 species
MA_826924g0010 ATLEUC1, IIL1 3-isopropylmalate dehydratase large subunit,... 0.03 OrthoFinder output from all 47 species
Ppi_g12956 ATLEUC1, IIL1 large subunit of methylthioalkylmalate isomerase &... 0.04 OrthoFinder output from all 47 species
Spa_g08987 ATLEUC1, IIL1 large subunit of methylthioalkylmalate isomerase &... 0.03 OrthoFinder output from all 47 species
Zm00001e013519_P003 ATLEUC1, IIL1,... large subunit of isopropylmalate isomerase heterodimer.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0034511 U3 snoRNA binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001030 Acoase/IPM_deHydtase_lsu_aba 53 403
No external refs found!