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  5. Lfl_g11174

Lfl_g11174 (STH)


Aliases : STH

Description : BBX class-IV transcription factor & original description: none


Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g11174

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene62651.t2 Aspi01Gene62651 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12122 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07621 STO BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01138 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20277 No alias BBX class-IV transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
MA_3117g0010 STH no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g36960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12390 STO BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g39275 No alias BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR000315 Znf_B-box 4 47
IPR000315 Znf_B-box 57 93
No external refs found!