1. Home
  2. Species
  3. Amblovenatum opulentum
  4. Sequence
  5. Aop_g25574

Aop_g25574 (LDL3)


Aliases : LDL3

Description : histone demethylase *(KDM1d) & original description: none


Gene families : OG0003426 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003426_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g25574

Target Alias Description ECC score Gene Family Method Actions
Aev_g06185 LDL3 histone demethylase *(KDM1d) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g27045 LDL3 histone demethylase *(KDM1d) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene46596.t1 LDL3, Aspi01Gene46596 histone demethylase *(KDM1d) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66928.t1 LDL3, Aspi01Gene66928 histone demethylase *(KDM1d) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g14216 LDL3 histone demethylase *(KDM1d) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.04G013700.1 LDL3, Ceric.04G013700 histone demethylase *(KDM1d) & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g10965 LDL3 histone demethylase *(KDM1d) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g10966 LDL3 histone demethylase *(KDM1d) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009833001 LDL3 Lysine-specific histone demethylase 1 homolog 3... 0.02 OrthoFinder output from all 47 species
GSVIVT01009834001 LDL3 Lysine-specific histone demethylase 1 homolog 3... 0.04 OrthoFinder output from all 47 species
MA_120420g0020 LDL3 lysine-specific demethylase (LDL3) 0.04 OrthoFinder output from all 47 species
Msp_g38960 LDL3 histone demethylase *(KDM1d) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g02424 LDL3 histone demethylase *(KDM1d) & original description: none 0.03 OrthoFinder output from all 47 species
Smo405878 LDL3 Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR007526 SWIRM 286 359
IPR002937 Amino_oxidase 588 1058
No external refs found!