Lfl_g11163 (UBP25)

Aliases : UBP25

Description : not classified & original description: none

Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g11163

Target	Alias	Description	ECC score	Gene Family Method
AT1G17110	UBP15	ubiquitin-specific protease 15	0.03	OrthoFinder output from all 47 species
AT3G14400	UBP25	ubiquitin-specific protease 25	0.03	OrthoFinder output from all 47 species
AT4G24560	UBP16	ubiquitin-specific protease 16	0.04	OrthoFinder output from all 47 species
Adi_g013898	UBP25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g27664	UBP25	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g30011	UBP23	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene00561.t1	UBP25, Aspi01Gene00561	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0078.g038135	UBP19	deubiquitinase *(UBP15-21) & original description: CDS=1162-3228	0.03	OrthoFinder output from all 47 species
Ceric.15G035800.1	UBP19, Ceric.15G035800	deubiquitinase *(UBP15-21) & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.22G015900.1	UBP25, Ceric.22G015900	not classified & original description: pacid=50613832...	0.05	OrthoFinder output from all 47 species
Dac_g01006	UBP25	deubiquitinase *(UBP25) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g03145	UBP18	deubiquitinase *(UBP15-21) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g07912	UBP23	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01001912001	UBP23	Protein degradation.peptidase families.cysteine-type...	0.03	OrthoFinder output from all 47 species
GSVIVT01014079001	UBP23	Protein degradation.peptidase families.cysteine-type...	0.03	OrthoFinder output from all 47 species
LOC_Os05g43480.1	UBP25, LOC_Os05g43480	deubiquitinase (UBP25)	0.07	OrthoFinder output from all 47 species
LOC_Os08g37350.1	UBP17, LOC_Os08g37350	deubiquitinase (UBP15-21)	0.03	OrthoFinder output from all 47 species
MA_132593g0020	UBP23	Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_717g0010	UBP19	deubiquitinase (UBP15-21)	0.02	OrthoFinder output from all 47 species
Mp1g03220.1	UBP25	Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Mp2g05560.1	UBP18	deubiquitinase (UBP15-21)	0.03	OrthoFinder output from all 47 species
Ore_g27850	UBP23	deubiquitinase *(UBP23) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g05280	UBP25	deubiquitinase *(UBP25) & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g08769	UBP25	deubiquitinase *(UBP25) & original description: none	0.06	OrthoFinder output from all 47 species
Sam_g04367	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Smo420048	UBP18	Protein degradation.peptidase families.cysteine-type...	0.04	OrthoFinder output from all 47 species
Solyc04g076210.3.1	UBP16, Solyc04g076210	deubiquitinase (UBP15-21)	0.03	OrthoFinder output from all 47 species
Solyc08g069050.3.1	UBP19, Solyc08g069050	deubiquitinase (UBP15-21)	0.02	OrthoFinder output from all 47 species
Spa_g12821	UBP25	deubiquitinase *(UBP25) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g01115	UBP23	deubiquiTinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g05216	UBP25	deubiquiTinase *(UBP25) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e003832_P001	UBP17, Zm00001e003832	deubiquitinase (UBP15-21)	0.04	OrthoFinder output from all 47 species
Zm00001e022516_P001	UBP17, Zm00001e022516	deubiquitinase (UBP15-21)	0.03	OrthoFinder output from all 47 species
Zm00001e024878_P003	UBP15, Zm00001e024878	deubiquitinase (UBP15-21)	0.05	OrthoFinder output from all 47 species
Zm00001e027381_P003	UBP25, Zm00001e027381	deubiquitinase (UBP25)	0.04	OrthoFinder output from all 47 species
Zm00001e036315_P001	UBP23, Zm00001e036315	deubiquitinase (UBP23)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004843	cysteine-type deubiquitinase activity	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein peptidase activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	deubiquitinase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001394	Peptidase_C19_UCH	23	339

External Links

No external refs found!

Lfl_g11163 (UBP25)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation