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  5. Aop_g25238

Aop_g25238


Description : GRAS-type transcription factor & original description: none


Gene families : OG0000181 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g25238
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Ala_g22781 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g60766 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11784 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g14021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70607 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05451.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05456.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32510.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene32519.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65531.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene72636.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g60547 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.08G022700.1 Ceric.08G022700 GRAS-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g14499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42116 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15158 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016520001 No alias RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
GSVIVT01024931001 ATGRAS2, SCL14, GRAS2 RNA biosynthesis.transcriptional activation.GRAS... 0.01 OrthoFinder output from all 47 species
LOC_Os11g47870.1 LOC_Os11g47870 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
MA_45656g0030 ATGRAS2, SCL14, GRAS2 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Nbi_g09779 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21508 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g27009 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g25190 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30250 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62353 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62859 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo74605 ATGRAS2, SCL14, GRAS2 RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
Smo80549 ATGRAS2, SCL14, GRAS2 RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
Solyc01g100200.3.1 ATGRAS2, SCL14,... transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Solyc10g086530.1.1 Solyc10g086530 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Spa_g07365 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g16511 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g17280 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21454 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g30865 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52612 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56681 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13215 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23007 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 325 701
No external refs found!