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  5. Lfl_g11132

Lfl_g11132 (CYCT1;4)


Aliases : CYCT1;4

Description : regulatory component *(CYCT) of CTDK-I polymerase-II kinase complex & original description: none


Gene families : OG0000467 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g11132

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00236330 CYCT1;4,... Cyclin-T1-3 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
AT4G19600 CYCT1;4 Cyclin family protein 0.03 OrthoFinder output from all 47 species
Adi_g059140 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Adi_g080715 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.03 OrthoFinder output from all 47 species
Ala_g21091 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ala_g26359 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Als_g12540 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.03 OrthoFinder output from all 47 species
Aspi01Gene39821.t1 Aspi01Gene39821 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15182 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Cba_g32371 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.02 OrthoFinder output from all 47 species
Dcu_g01600 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.02 OrthoFinder output from all 47 species
Dde_g10347 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ore_g10656 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.04 OrthoFinder output from all 47 species
Pir_g05031 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Pir_g17325 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Pnu_g12930 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.03 OrthoFinder output from all 47 species
Ppi_g02214 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.04 OrthoFinder output from all 47 species
Ppi_g08960 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.03 OrthoFinder output from all 47 species
Spa_g15172 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Zm00001e015246_P002 CYCT1;4, Zm00001e015246 cyclin (CYCT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
CC GO:0000439 transcription factor TFIIH core complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR006671 Cyclin_N 69 200
No external refs found!