Aop_g23683


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g23683

Target Alias Description ECC score Gene Family Method Actions
Adi_g033689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036755 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067033 CRR21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g098886 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099272 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g100823 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26450 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g05696 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06720 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19303 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07960 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09402 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g27221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36666 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g42240 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0027.g023505 No alias not classified & original description: CDS=32-2620 0.01 OrthoFinder output from all 47 species
Azfi_s0148.g053129 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2052 0.03 OrthoFinder output from all 47 species
Azfi_s0652.g081079 No alias not classified & original description: CDS=1-2169 0.01 OrthoFinder output from all 47 species
Azfi_s1334.g101644 No alias not classified & original description: CDS=1-3543 0.01 OrthoFinder output from all 47 species
Azfi_s4317.g118724 No alias not classified & original description: CDS=1-465 0.01 OrthoFinder output from all 47 species
Cba_g05302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29381 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34536 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.17G054900.1 DOT4, Ceric.17G054900 not classified & original description: pacid=50617812... 0.02 OrthoFinder output from all 47 species
Ceric.28G001700.1 Ceric.28G001700 not classified & original description: pacid=50570577... 0.01 OrthoFinder output from all 47 species
Ceric.31G002400.1 Ceric.31G002400 not classified & original description: pacid=50574432... 0.02 OrthoFinder output from all 47 species
Ceric.39G022100.1 Ceric.39G022100 not classified & original description: pacid=50582510... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.200 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre12.g483700 OSB4 Cell cycle.organelle machineries.DNA... 0.01 OrthoFinder output from all 47 species
Dac_g05441 RARE1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18571 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g33764 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g49128 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13146 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29034 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032950001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Gb_20571 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.01 OrthoFinder output from all 47 species
LOC_Os07g31000.1 LOC_Os07g31000 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g53877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33303 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g33305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25371 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g30589 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34215 OTP84 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g34519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48694 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g05258 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27639 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g28135 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01804 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35928 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03007 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03395 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g28912 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32558 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46650 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g46859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g47021 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57955 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63642 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63818 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23595 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03245 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06806 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07449 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09510 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30507 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32232 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g47181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56969 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57919 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59344 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002209 No alias not classified & original description: CDS=347-2416 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003060 No alias not classified & original description: CDS=1-2058 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013552 No alias not classified & original description: CDS=1-2598 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0081.g017989 No alias not classified & original description: CDS=1-1851 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0133.g022243 No alias not classified & original description: CDS=1-1908 0.03 OrthoFinder output from all 47 species
Spa_g01489 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g13768 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18928 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g23503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g23949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g27693 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g28119 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g33733 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51341 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52254 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53135 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05541 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g23008 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26971 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43833 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 381 403
IPR002885 Pentatricopeptide_repeat 789 811
IPR002885 Pentatricopeptide_repeat 279 300
IPR002885 Pentatricopeptide_repeat 687 712
IPR002885 Pentatricopeptide_repeat 177 199
IPR002885 Pentatricopeptide_repeat 713 760
IPR002885 Pentatricopeptide_repeat 203 249
IPR002885 Pentatricopeptide_repeat 406 454
IPR002885 Pentatricopeptide_repeat 508 555
IPR002885 Pentatricopeptide_repeat 611 657
IPR002885 Pentatricopeptide_repeat 101 147
IPR002885 Pentatricopeptide_repeat 305 351
No external refs found!