Aop_g23401


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g23401

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00240430 OSB3,... RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 OrthoFinder output from all 47 species
AT1G25360 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g002735 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g003294 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004508 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005707 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g014779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g050950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21502 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Als_g27895 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13662 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g15519 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g21995 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26054 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.03G014400.1 Ceric.03G014400 not classified & original description: pacid=50572365... 0.06 OrthoFinder output from all 47 species
Ceric.11G080200.1 Ceric.11G080200 not classified & original description: pacid=50595969... 0.08 OrthoFinder output from all 47 species
Ceric.13G078100.1 Ceric.13G078100 not classified & original description: pacid=50636136... 0.03 OrthoFinder output from all 47 species
Ceric.20G051200.1 Ceric.20G051200 not classified & original description: pacid=50566546... 0.03 OrthoFinder output from all 47 species
Ceric.34G043400.1 Ceric.34G043400 not classified & original description: pacid=50623137... 0.05 OrthoFinder output from all 47 species
Dde_g46627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07044 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g33253 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10426261g0020 CRR22 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_10429958g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_9360929g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Msp_g08590 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g21360 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28787 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41122 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05327 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05844 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g19619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63120 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63498 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29710 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g49408 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53286 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g26489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g33599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo76916 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Spa_g14320 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14725 MEF21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17157 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17160 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g19043 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20461 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g20467 CRR2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g23605 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23609 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23800 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45659 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g47991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54647 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 354 377
IPR002885 Pentatricopeptide_repeat 419 443
IPR002885 Pentatricopeptide_repeat 152 173
IPR002885 Pentatricopeptide_repeat 48 75
IPR002885 Pentatricopeptide_repeat 280 326
IPR002885 Pentatricopeptide_repeat 177 225
IPR002885 Pentatricopeptide_repeat 76 122
No external refs found!