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  5. Lfl_g10951

Lfl_g10951


Description : not classified & original description: none


Gene families : OG0005997 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005997_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g10951

Target Alias Description ECC score Gene Family Method Actions
LOC_Os09g21520.2 LOC_Os09g21520 DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Sam_g10064 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e034031_P002 Zm00001e034031 DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 453 548
IPR011545 DEAD/DEAH_box_helicase_dom 124 299
No external refs found!