Aop_g23325


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g23325

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00184210 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Adi_g005755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g040549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060025 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12481 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36028 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31156 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05294 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27896 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g41404 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0261.g060752 CRR22 not classified & original description: CDS=1-1500 0.03 OrthoFinder output from all 47 species
Cba_g02715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20840 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29359 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38987 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.06G000900.1 OTP84, Ceric.06G000900 not classified & original description: pacid=50619446... 0.03 OrthoFinder output from all 47 species
Ceric.07G035900.1 Ceric.07G035900 not classified & original description: pacid=50625961... 0.03 OrthoFinder output from all 47 species
Ceric.09G023800.1 Ceric.09G023800 not classified & original description: pacid=50587607... 0.03 OrthoFinder output from all 47 species
Ceric.09G065700.1 Ceric.09G065700 not classified & original description: pacid=50586915... 0.03 OrthoFinder output from all 47 species
Ceric.11G040900.1 Ceric.11G040900 not classified & original description: pacid=50596742... 0.04 OrthoFinder output from all 47 species
Ceric.12G097500.1 Ceric.12G097500 not classified & original description: pacid=50601961... 0.03 OrthoFinder output from all 47 species
Ceric.13G015700.1 Ceric.13G015700 not classified & original description: pacid=50636078... 0.05 OrthoFinder output from all 47 species
Ceric.14G013800.1 Ceric.14G013800 not classified & original description: pacid=50633719... 0.03 OrthoFinder output from all 47 species
Ceric.17G079000.1 Ceric.17G079000 not classified & original description: pacid=50617699... 0.05 OrthoFinder output from all 47 species
Ceric.18G024700.1 Ceric.18G024700 not classified & original description: pacid=50621916... 0.03 OrthoFinder output from all 47 species
Ceric.18G079500.1 Ceric.18G079500 not classified & original description: pacid=50621579... 0.04 OrthoFinder output from all 47 species
Ceric.19G055600.1 MEF19, Ceric.19G055600 not classified & original description: pacid=50576555... 0.03 OrthoFinder output from all 47 species
Ceric.1Z048400.1 Ceric.1Z048400 not classified & original description: pacid=50571131... 0.03 OrthoFinder output from all 47 species
Ceric.21G042400.1 Ceric.21G042400 not classified & original description: pacid=50602832... 0.03 OrthoFinder output from all 47 species
Ceric.21G088100.1 Ceric.21G088100 not classified & original description: pacid=50603070... 0.04 OrthoFinder output from all 47 species
Ceric.23G048800.1 Ceric.23G048800 not classified & original description: pacid=50611258... 0.03 OrthoFinder output from all 47 species
Ceric.25G017100.1 OTP86, Ceric.25G017100 not classified & original description: pacid=50593496... 0.04 OrthoFinder output from all 47 species
Ceric.26G013500.1 Ceric.26G013500 not classified & original description: pacid=50600195... 0.04 OrthoFinder output from all 47 species
Ceric.26G056100.1 Ceric.26G056100 not classified & original description: pacid=50599681... 0.04 OrthoFinder output from all 47 species
Ceric.27G064200.1 Ceric.27G064200 not classified & original description: pacid=50604994... 0.03 OrthoFinder output from all 47 species
Ceric.28G055900.1 Ceric.28G055900 not classified & original description: pacid=50569676... 0.03 OrthoFinder output from all 47 species
Ceric.28G059900.1 Ceric.28G059900 not classified & original description: pacid=50569765... 0.03 OrthoFinder output from all 47 species
Ceric.28G070600.1 Ceric.28G070600 not classified & original description: pacid=50569629... 0.05 OrthoFinder output from all 47 species
Ceric.29G055100.1 Ceric.29G055100 not classified & original description: pacid=50625141... 0.05 OrthoFinder output from all 47 species
Ceric.30G024700.1 Ceric.30G024700 not classified & original description: pacid=50608167... 0.03 OrthoFinder output from all 47 species
Ceric.30G032300.1 Ceric.30G032300 not classified & original description: pacid=50608635... 0.04 OrthoFinder output from all 47 species
Ceric.34G069900.1 Ceric.34G069900 not classified & original description: pacid=50624195... 0.03 OrthoFinder output from all 47 species
Ceric.36G048700.1 Ceric.36G048700 not classified & original description: pacid=50569051... 0.04 OrthoFinder output from all 47 species
Ceric.37G034100.1 Ceric.37G034100 not classified & original description: pacid=50616957... 0.03 OrthoFinder output from all 47 species
Ceric.37G036500.1 Ceric.37G036500 not classified & original description: pacid=50616338... 0.04 OrthoFinder output from all 47 species
Ceric.38G032700.1 Ceric.38G032700 not classified & original description: pacid=50579462... 0.03 OrthoFinder output from all 47 species
Ceric.39G007300.1 Ceric.39G007300 not classified & original description: pacid=50582343... 0.05 OrthoFinder output from all 47 species
Dac_g04720 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g18428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19068 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g20337 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g21033 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22537 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28223 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28706 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g30131 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g30284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31017 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35435 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35657 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g36002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42645 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21990 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22352 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22526 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25800 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01021756001 No alias Pentatricopeptide repeat-containing protein At4g21300... 0.04 OrthoFinder output from all 47 species
LOC_Os09g07780.1 OTP84, LOC_Os09g07780 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Len_g17553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18318 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18566 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g31718 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g12704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429043g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
MA_119519g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_130735g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_205762g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Msp_g03995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06015 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g06422 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g17296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g40961 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41126 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48107 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17545 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g22746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03900 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13845 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16488 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18869 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo30095 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Spa_g01551 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g01728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g01950 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g04485 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g13768 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14151 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14320 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14609 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14979 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g16047 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g16452 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g17627 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18780 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g20031 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21107 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21449 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21849 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g22000 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23504 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23609 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23690 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23979 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25007 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25999 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26517 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27671 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28085 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g28125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30264 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30543 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g33277 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g38315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39147 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47078 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47084 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g47167 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g47991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48095 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g49488 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53201 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54147 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56610 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05224 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05669 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06042 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06449 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g11929 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e041987_P001 Zm00001e041987 Pentatricopeptide repeat-containing protein At2g37320... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 777 800
IPR002885 Pentatricopeptide_repeat 553 579
IPR002885 Pentatricopeptide_repeat 581 607
IPR002885 Pentatricopeptide_repeat 379 409
IPR002885 Pentatricopeptide_repeat 149 170
IPR002885 Pentatricopeptide_repeat 807 836
IPR002885 Pentatricopeptide_repeat 878 902
IPR002885 Pentatricopeptide_repeat 250 275
IPR002885 Pentatricopeptide_repeat 276 322
IPR002885 Pentatricopeptide_repeat 679 726
IPR002885 Pentatricopeptide_repeat 73 121
IPR002885 Pentatricopeptide_repeat 479 524
IPR002885 Pentatricopeptide_repeat 176 221
No external refs found!