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  5. Aop_g23018

Aop_g23018


Description : component *(eL6) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001317 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001317_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g23018
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00218700 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AT1G18540 No alias Ribosomal protein L6 family protein 0.02 OrthoFinder output from all 47 species
Als_g34695 No alias component *(eL6) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aob_g18157 No alias component *(eL6) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cba_g22295 No alias component *(eL6) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021127.127 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Cre01.g011000 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Dcu_g34737 No alias component *(eL6) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
LOC_Os04g39700.1 LOC_Os04g39700 component RPL6 of LSU proteome component 0.03 OrthoFinder output from all 47 species
MA_108607g0010 No alias component RPL6 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Mp3g11670.1 No alias component RPL6 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Pp3c1_24300V3.1 Pp3c1_24300 Ribosomal protein L6 family protein 0.02 OrthoFinder output from all 47 species
Ppi_g24337 No alias component *(eL6) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g28246 No alias component *(eL6) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g06914 No alias component *(eL6) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Solyc11g012110.2.1 Solyc11g012110 component RPL6 of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR000915 60S_ribosomal_L6E 117 226
No external refs found!