Cpa|evm.model.tig00000194.49


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL5 component


Gene families : OG_01_0002752 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002752_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000194.49
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00162800 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 Archaeplastida
AT3G25520 OLI5, RPL5A, PGY3, ATL5 ribosomal protein L5 0.34 Archaeplastida
AT5G39740 OLI7, RPL5B ribosomal protein L5 B 0.39 Archaeplastida
Cre14.g621450 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.16 Archaeplastida
GSVIVT01038188001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 Archaeplastida
Gb_16695 No alias component RPL5 of LSU proteome component 0.13 Archaeplastida
LOC_Os01g67134.1 No alias component RPL5 of LSU proteome component 0.24 Archaeplastida
MA_70965g0010 No alias component RPL5 of LSU proteome component 0.18 Archaeplastida
Mp4g15800.1 No alias component RPL5 of LSU proteome component 0.34 Archaeplastida
Pp3c11_6420V3.1 No alias ribosomal protein L5 B 0.29 Archaeplastida
Pp3c1_7160V3.1 No alias ribosomal protein L5 B 0.14 Archaeplastida
Pp3c2_31540V3.1 No alias ribosomal protein L5 B 0.07 Archaeplastida
Pp3c7_25660V3.1 No alias ribosomal protein L5 B 0.23 Archaeplastida
Smo144921 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida
Solyc06g007670.4.1 No alias component RPL5 of LSU proteome component 0.35 Archaeplastida
Solyc06g082870.4.1 No alias component RPL5 of LSU proteome component 0.21 Archaeplastida
Solyc09g020130.3.1 No alias component RPL5 of LSU proteome component 0.2 Archaeplastida
Zm00001e000256_P001 No alias component RPL5 of LSU proteome component 0.23 Archaeplastida
Zm00001e018972_P001 No alias component RPL5 of LSU proteome component 0.19 Archaeplastida
Zm00001e028563_P004 No alias component RPL5 of LSU proteome component 0.31 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
MF GO:0008097 5S rRNA binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005485 Rbsml_L5_euk/L18_arc 14 176
IPR025607 Rbsml_L5e/L18P_C 193 284
No external refs found!