Aliases : ATCNGC20, CNGC20, CNBT1
Description : cyclic nucleotide-gated cation channel *(CNGC) & original description: none
Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre10.g450100 | No alias | Cyclic nucleotide-gated ion channel 18 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g37101 | DND2, CNGC4,... | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.04 | OrthoFinder output from all 47 species | |
MA_577986g0010 | ATCNGC20, CNGC20, CNBT1 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Pir_g12194 | ATCNGC9, CNGC9 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g12590 | No alias | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g02085 | ATCNGC20, CNGC20, CNBT1 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005216 | monoatomic ion channel activity | IEA | Interproscan |
BP | GO:0006811 | monoatomic ion transport | IEA | Interproscan |
CC | GO:0016020 | membrane | IEA | Interproscan |
BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
MF | GO:0005049 | nuclear export signal receptor activity | IEP | HCCA |
CC | GO:0005778 | peroxisomal membrane | IEP | HCCA |
BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
BP | GO:0006813 | potassium ion transport | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0007031 | peroxisome organization | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
BP | GO:0030001 | metal ion transport | IEP | HCCA |
CC | GO:0030991 | intraciliary transport particle A | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
CC | GO:0031903 | microbody membrane | IEP | HCCA |
CC | GO:0042579 | microbody | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
MF | GO:0140104 | molecular carrier activity | IEP | HCCA |
MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005821 | Ion_trans_dom | 114 | 436 |
No external refs found! |