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  5. Aop_g22392

Aop_g22392


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g22392

Target Alias Description ECC score Gene Family Method Actions
Ala_g04690 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54731 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g33405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04211 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g13947 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g39388 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g42032 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g48611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g21211 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g45774 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 639 693
IPR002885 Pentatricopeptide_repeat 522 570
IPR002885 Pentatricopeptide_repeat 1 57
IPR002885 Pentatricopeptide_repeat 76 119
IPR002885 Pentatricopeptide_repeat 422 468
IPR002885 Pentatricopeptide_repeat 310 355
IPR002885 Pentatricopeptide_repeat 283 305
IPR002885 Pentatricopeptide_repeat 196 224
No external refs found!