Aop_g22379

Description : not classified & original description: none

Gene families : OG0004721 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004721_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g22379

Target	Alias	Description	ECC score	Gene Family Method
Aev_g07951	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Ala_g17279	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ceric.13G022800.1	Ceric.13G022800	not classified & original description: pacid=50636376...	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021357.51	No alias	ATP-dependent DNA helicase At3g02060, chloroplastic...	0.02	OrthoFinder output from all 47 species
Dac_g42486	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g04918	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g08581	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Gb_38755	No alias	ATP-dependent DNA helicase At3g02060, chloroplastic...	0.05	OrthoFinder output from all 47 species
Lfl_g05693	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
MA_190693g0010	No alias	ATP-dependent DNA helicase At3g02060, chloroplastic...	0.02	OrthoFinder output from all 47 species
Mp2g07230.1	No alias	ATP-dependent DNA helicase At3g02060, chloroplastic...	0.04	OrthoFinder output from all 47 species
Nbi_g10930	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g30043	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006439	No alias	not classified & original description: CDS=315-2762	0.04	OrthoFinder output from all 47 species
Smo77276	No alias	ATP-dependent DNA helicase At3g02060, chloroplastic...	0.03	OrthoFinder output from all 47 species
Spa_g26930	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003711	CarD-like/TRCF_RID	198	293
IPR011545	DEAD/DEAH_box_helicase_dom	344	481
IPR001650	Helicase_C	529	628

External Links

No external refs found!

Aop_g22379

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation