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Aliases : NPQ4, PSBS
Description : not classified & original description: none
Gene families : OG0002938 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002938_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aop_g21918 | |
| Cluster | HCCA: Cluster_278 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G44575 | NPQ4, PSBS | Chlorophyll A-B binding family protein | 0.03 | OrthoFinder output from all 47 species | |
| Als_g55405 | NPQ4, PSBS | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g57804 | NPQ4, PSBS | non-photochemical quenching PsbS protein & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g15210 | NPQ4, PSBS | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g15673 | NPQ4, PSBS | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Cba_g78984 | NPQ4, PSBS | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.36G021200.1 | NPQ4, PSBS,... | non-photochemical quenching PsbS protein & original... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_30734 | NPQ4, PSBS | non-photochemical quenching PsbS protein | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g64960.1 | NPQ4, PSBS,... | non-photochemical quenching PsbS protein | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g15571 | NPQ4, PSBS | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g15847 | NPQ4, PSBS | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pnu_g32714 | NPQ4, PSBS | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Ppi_g02820 | NPQ4, PSBS | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g16538 | NPQ4, PSBS | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g17059 | NPQ4, PSBS | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g17060 | NPQ4, PSBS | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g25149 | NPQ4, PSBS | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Sam_g11981 | No alias | non-photochemical quenching PsbS protein & original... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g060340.3.1 | NPQ4, PSBS,... | non-photochemical quenching PsbS protein | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0009507 | chloroplast | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009536 | plastid | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 179 | 247 |
| No external refs found! |