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Aliases : CAB4, LHCA4
Description : component *(LHCa4) of LHC-I complex & original description: none
Gene families : OG0000742 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000742_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00264770 | CAB4, LHCA4,... | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00013p00180670 | LHCA2,... | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00131p00114510 | evm_27.TU.AmTr_v1... | Photosystem I chlorophyll a/b-binding protein 6,... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G47470 | CAB4, LHCA4 | light-harvesting chlorophyll-protein complex I subunit A4 | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g01073 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene37279.t1 | LHCA2, Aspi01Gene37279 | component *(LHCa2) of LHC-I complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene56262.t1 | CAB4, LHCA4,... | component *(LHCa4) of LHC-I complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene61720.t1 | CAB4, LHCA4,... | component *(LHCa4) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0013.g013231 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.12G094100.1 | LHCA2, Ceric.12G094100 | not classified & original description: pacid=50600668... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.33G037200.1 | CAB4, LHCA4,... | component *(LHCa4) of LHC-I complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g272650 | LHCA5 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.02 | OrthoFinder output from all 47 species | |
| Cre06.g278213 | CAB4, LHCA4 | Chlorophyll a-b binding protein P4, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
| Cre10.g425900 | CAB4, LHCA4 | Chlorophyll a-b binding protein 4, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
| Cre10.g452050 | CAB4, LHCA4 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.02 | OrthoFinder output from all 47 species | |
| Cre16.g687900 | LHCA5 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g04958 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g08113 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g03606 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g29671 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g34548 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g55433 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g38514 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_65346g0010 | CAB4, LHCA4 | Chlorophyll a-b binding protein P4, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g07840.1 | CAB4, LHCA4 | component LHCa4 of LHC-I complex | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g13180.1 | LHCA2 | component LHCa2 of LHC-I complex | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g23129 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g16925 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g07782 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g07783 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g43266 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g10927 | No alias | component *(LHCa4) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16961 | No alias | component *(LHCa4) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo270427 | CAB4, LHCA4 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.03 | OrthoFinder output from all 47 species | |
| Smo446130 | LHCA2 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc06g069730.3.1 | CAB4, LHCA4,... | component LHCa4 of LHC-I complex | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g009200.2.1 | LHCA2*1, LHCA6,... | component LHCa6 of LHC-I complex | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g11550 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g13077 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.13 | OrthoFinder output from all 47 species | |
| Spa_g16233 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06738 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g07098 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| MF | GO:0140359 | ABC-type transporter activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 118 | 277 |
| No external refs found! |