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  5. Lfl_g10792

Lfl_g10792


Description : not classified & original description: none


Gene families : OG0001699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001699_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g10792

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00037420 evm_27.TU.AmTr_v1... DNA cross-link repair protein SNM1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ceric.39G017300.1 Ceric.39G017300 not classified & original description: pacid=50582945... 0.03 OrthoFinder output from all 47 species
Cre09.g399907 No alias DNA ligase 6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre12.g513254 SNM1, ATSNM1 DNA cross-link repair protein SNM1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR011084 DRMBL 242 378
No external refs found!