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  5. Aop_g21732

Aop_g21732


Description : component *(NOT11) of mRNA deadenylation CCR4-NOT complex & original description: none


Gene families : OG0005591 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005591_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g21732

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020610.97 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g05481 No alias component *(NOT11) of mRNA deadenylation CCR4-NOT... 0.03 OrthoFinder output from all 47 species
Dde_g03800 No alias component *(NOT11) of mRNA deadenylation CCR4-NOT... 0.03 OrthoFinder output from all 47 species
MA_48786g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g05910.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g12251 No alias component *(NOT11) of mRNA deadenylation CCR4-NOT... 0.03 OrthoFinder output from all 47 species
Zm00001e011041_P003 Zm00001e011041 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0030014 CCR4-NOT complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR019312 CNOT11 298 422
No external refs found!