Aop_g21708 (ATGRAS2, SCL14, GRAS2)


Aliases : ATGRAS2, SCL14, GRAS2

Description : GRAS-type transcription factor & original description: none


Gene families : OG0000181 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g21708

Target Alias Description ECC score Gene Family Method Actions
AT2G29065 No alias GRAS family transcription factor 0.03 OrthoFinder output from all 47 species
AT3G46600 No alias GRAS family transcription factor 0.02 OrthoFinder output from all 47 species
Adi_g115872 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08267 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g30898 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36937 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38338 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g60766 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11784 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene24624.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene37652.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65531.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene72628.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0298.g063607 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: CDS=1-2388 0.04 OrthoFinder output from all 47 species
Cba_g23067 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33193 No alias GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g60547 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g72741 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G055000.1 Ceric.20G055000 GRAS-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g04050 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g15292 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g18741 No alias GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g19033 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09269 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47799 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16289 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31430 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016522001 ATGRAS2, SCL14, GRAS2 RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
GSVIVT01016523001 ATGRAS2, SCL14, GRAS2 RNA biosynthesis.transcriptional activation.GRAS... 0.04 OrthoFinder output from all 47 species
GSVIVT01024935001 ATGRAS2, SCL14, GRAS2 RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
Gb_29764 No alias transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
LOC_Os03g40080.1 LOC_Os03g40080 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Msp_g11143 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14201 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03724 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08951 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g21507 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21508 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g24963 No alias GRAS-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g30389 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g18022 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30100 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05296 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62353 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020509 No alias GRAS-type transcription factor & original description: CDS=1-1197 0.03 OrthoFinder output from all 47 species
Solyc04g011630.1.1 Solyc04g011630 transcription factor (GRAS) 0.04 OrthoFinder output from all 47 species
Solyc05g053090.2.1 ATGRAS2, SCL14,... transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Spa_g07397 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12105 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g16511 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53582 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e020921_P001 Zm00001e020921 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Zm00001e020937_P001 Zm00001e020937 transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
Zm00001e020943_P001 Zm00001e020943 transcription factor (GRAS) 0.07 OrthoFinder output from all 47 species
Zm00001e020944_P001 ATGRAS2, SCL14,... transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 477 847
No external refs found!